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OpenSpecimen Summary
Tags: Lcbru Software Category
Overview
Sample management tool formerly called CaTissue which was developed by the National Cancer Institute, now developed by Krishagni.
Basic Overview
- Storage Container
- hierarchical set of containers that store samples. For example, box, draw, shelf, freezer, room, building
- Storage Type
- A template for a Storage Container
- Site
- An real instance of a storage
- Collection Protocol
- A series of samples and aliquots derived from samples for a particular study.
How To
- OpenSpecimen HowTo Build from Source Code
- OpenSpecimen HowTo Install
- OpenSpecimen HowTo Restart
- OpenSpecimen HowTo Manage Users
- OpenSpecimen HowTo Create Protocol
- OpenSpecimen HowTo Create Searches
- OpenSpecimen HowTo View Map of Locations
- OpenSpecimen HowTo Backup Database for Development Server
- OpenSpecimen HowTo Use Expedited Entry for a Study
- OpenSpecimen HowTo Specify Format of Master Patient Index ID
- OpenSpecimen HowTo Register a participant into a protocol using the standard UI
- OpenSpecimen HowTo Register a participant into a protocol using the expedited UI
- OpenSpecimen HowTo Create Containers
- OpenSpecimen HowTo Import Bulk Data
Gotchas
- OpenSpecimen Gotchas liquibase: Waiting for changelog lock
- OpenSpecimen Gotchas Sample Entry 'Specimen Label Required' Error
Modules and Updates
Community / Documentation
- Open Specimen Website
- Open Specimen Forum
- OpenSpecimen Github Repository
- Open Specimen Documentation
- REST API Documentation
- Deployment and Configuration
- Expedited Entry Extension on Github
- Support
- support@…
- Support Developer
- nitesh.marwaha@…
Instances
For now: SystemAdmin
Note:
See TracWiki
for help on using the wiki.
