Changes between Version 8 and Version 9 of LEGACY - Integration phase 20101112


Ignore:
Timestamp:
01/10/11 14:10:02 (13 years ago)
Author:
Nick Holden
Comment:

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  • LEGACY - Integration phase 20101112

    v8 v9  
    2929  * UIDGEN (has a project in svn)
    3030  * The ability to design label formats. Knowledge of the latter is restricted to Vasil working in a Windows environment. There is no project within svn covering this.
     31
     32
     33----
     34
     35Project updates / issues for BRICCS tech meeting, 11 January 2011
     36
     37Note: Following the Oxford / NIHR conference, work streams relating to C3PR have been postponed pending review of EDGE as platofrm for research unit management data
     38
     39Infrastructure
     40- Development environments (Dave)
     41  Current status: Have server resources within UoL dedicated to BRICCS development, with four virtual servers enabling us to test various configurations of software
     42  A more flexible approach has been taken, with servers currently being used to create and test 'deployment' and 'upgrade' routines.
     43  These resources will also be used for testing modifications to software.
     44
     45- Establish 'test' and 'training' versions (Dave, Nick, Jeff)
     46  A test+training version of Onyx is now working on UHL's servers
     47  A test+training version of caTissue is to be deployed on UoL servers very soon
     48  A test+training version on i2b2 will be deployed on UHL's servers soon
     49
     50- Development tools (Dave)
     51  Trac is in use for documentation and technical issue tracking
     52  Subversion and Maven in use for storing programs under development
     53
     54- Backup / restore (Dave)
     55  System restore routines being tested on development servers
     56  Data backup for UoL is handled by RCS
     57  Data backup for UHL (Onyx) is currently within BRICCS (Nick)
     58  Data backup for UHL (i2b2) will be handled by UHL IMT
     59
     60- Test scripts (Dave)
     61  Development of test routines underway
     62
     63- System security review (Dave)
     64  Not yet underway
     65
     66Onyx (Nick)
     67
     68Note: a new version of Onyx, including an easier questionnaire creation tool, will be released shortly
     69
     70- Questionnaire review ongoing
     71
     72- feedback from teleconference with Philippe / Vincent re audit and validation options ? decisions ?
     73
     74- data export trials being undertaken (Jeff) ? progress ? what data goes to i2b2? what (if any) goes anywhere else, e.g. for reporting?
     75
     76- report.php chart functions (Vasil) ongoing, including interview/notes data correlation ? timetable? integrate with reports generated from exported data?
     77
     78caTissue (Nick currently)
     79
     80- caTissue now in its (semi-)permanent home on briccs-3
     81
     82- caTissue upgrade to v1.2 temporarily delayed due to delay in release of v1.2
     83
     84- exploration of API for script / bar code reader / multiple data entry (Jeff) ? progress ?
     85
     86i2b2 (Jeff)
     87
     88- Discussions with i2b2 developers regarding ontologies has resulted in us working with a team at Stanford developing a cell for i2b2 which enables us to 'pull' ontologies from a library (likely including SNOMED CT) when needed for specific data loading into i2b2. Progress expected during early months of 2011, and therefore fits our timetable.
     89
     90- Successful deployment of a test i2b2 installation complete
     91
     92- Next step is to deploy i2b2 on UHL test server, and attempt load of test data from Onyx, mapping data to SNOMED CT codes en route.
     93
     94- Ongoing discussion with UHL IMT regarding greater use of Jason to support data aggregation from UHL systems.
     95
     96Clinical informatics /  registry
     97
     98- Outline discussions with Trevor Howlett scoping objectives complete
     99
     100- Although PATS, Workstation, etc., all offer some valuable data, none offer a full systematic EPR without major strategic input by UHL. ? decisions ?
     101
     102Management tool (Nick)
     103
     104- Amendments being made to collect OPD recruitment data
     105
     106Genomics data
     107
     108- Deferred for now.