i2b2 Instance Live

Tags: Lcbru Application Instance UhlLinuxServer i2b2

Technical Details

URL

​http://uhlbriccsapp03.xuhl-tr.nhs.uk/main

Admin URL

​http://uhlbriccsapp03.xuhl-tr.nhs.uk/admin

Server

uhlbriccsapp03.xuhl-tr.nhs.uk

Website Directory

/var/www

Application Directory

AskNick

Database Type

SqlServer

Database Server

UHLSQLBRICCSDB\UHLBRICCSDB

Database

see below

Website Error Logging

/var/log/apache2/error.log

Tomcat Error Logging

AskNick

Apache Config

/etc/apache2

Databases

Each project of i2b2 has 3 databases:

• Security Database (usually ends '_workdata')
• Ontology Database (usually ends '_metadata')
• Data Database (usually ends '_data')

BRICCS

• i2b2_app03_b1_workdata
• i2b2_app03_b1_metadata
• i2b2_app03_b1_data

GENVASC

• i2b2_app03_genvasc_WorkData
• i2b2_app03_genvasc_MetaData
• i2b2_app03_genvasc_Data

Bioresource

• i2b2_app03_bioresource_WorkData
• i2b2_app03_bioresource_MetaData
• i2b2_app03_bioresource_Data

Cron Tasks

Check List

Standard

• [ ] Do I have admin rights to system? AskNick
• / Can I log on to system?
• [ ] Can I restart the server? AskNick
• [ ] Can I create a user? AskNick
• [ ] Can I see the errors?
  • / Website
  • [ ] Tomcat
• [ ] Does it use Nick's email or other account details?
  • [ ] Apache Config server admin email address
• [ ] Who do we contact for help
• / Basic training
• [ ] Latest version in source control?
• [ ] How is it Backed Up?
• / Database server / username / password
• / Do I have admin database access?
• / Database read only account?
• / Apache config
• [ ] Cron Tasks

Specific

Error: Macro BackLinks(None) failed

'Environment' object has no attribute 'get_db_cnx'