Changes between Version 7 and Version 8 of i2b2 Data Import Pathology Mapping v2


Ignore:
Timestamp:
04/17/13 10:02:06 (11 years ago)
Author:
Richard Bramley
Comment:

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  • i2b2 Data Import Pathology Mapping v2

    v7 v8  
    3838|| MICRO_ORGANISM_TESTS ||||  see below  ||
    3939|| TRANS_PROFILE_TESTS || 99|| Test_Code_Key ||
     40|| HISTO_STAINS || 481 || Stain_Code_Key ||
     41
     42=== Microbiology
    4043
    4144The MICRO_ORGANISM_TESTS table is a bit different to the rest (If it is a test result table at all).  It has two candidate test type columns: MICRO_ORGANISM and MICRO_ORGANISM_TESTS.  The second being the first one with a suffix.  The number of test types using the different candidate codes is:
    … …  
    4750This cannot be correct.  The MICRO_ORGANISM_TESTS column is unique.  I need to understand what this table represents.
    4851
     52=== Histology
    4953
    50 
     54I do not understand the Histology tables.  I have taken a guess that the HISTO_STAINS is the table most similar to test results.  However, I think it is probably more complicated than this.