i2b2 AUG 2013

Program

NLP Workshop

1. UMLS Ontologies and Ontology Resources (Olivier Bodenreider)
2. Ontology-based De-identification of Clinical Naratives (Finch and McMurry)
3. Ontology-based Discovery of Disease Activity from the Clinical Record (Lin)
4. Ontology Normalisation of the Clinical Narrative (Chen)
5. Ontology Concept Selection (Yu)
6. Active Learning for Ontology-based Phenotyping (Dligach)
7. Conclusion

Academic User Group

1. Genomic Cell (Shawn Murphy and Lori Philips)
2. SMART Apps (Wattanasin)
3. i2b2 Roadmap (Shawn Murphy)
4. Planning for the future (Kohane)
5. From Genetic Variants to i2b2 using NoSQL database (Matteo Gabetta - Pavia)
6. Extending i2b2 with the R Statistical Platform
7. Integrated Data Repository Toolkit (IDRT) and ETL Tools (Sebastian Mate - Erlangen; Christian Bauer - Goettingen)

i2b2 SHRINE Conference

1. SHRINE Clinical Trials (CT) Functionality and Roadmap (Shawn Murphy)
2. SHRINE National Pilot Lessons Learned
3. SHRINE Ontology Panel
4. University of California Research Exchange (UC ReX) (Doug Berman)
5. Preparation for Patient-Centred Research (Ken Mandl)
6. Case Study: Improve Care Now (Peter Margolis)

NLP Workshop

UMLS Ontologies and Ontology Resources

Ontology-based De-identification of Clinical Naratives

Ontology-based Discovery of Disease Activity from the Clinical Record

Ontology Normalisation of the Clinical Narrative

Ontology Concept Selection

Active Learning for Ontology-based Phenotyping

Conclusion

Academic User Group

Genomic Cell

SMART Apps

i2b2 Roadmap

Planning for the future

From Genetic Variants to i2b2 using NoSQL database

Extending i2b2 with the R Statistical Platform

Integrated Data Repository Toolkit (IDRT) and ETL Tools

i2b2 SHRINE Conference

SHRINE Clinical Trials (CT) Functionality and Roadmap

SHRINE National Pilot Lessons Learned

SHRINE Ontology Panel

University of California Research Exchange (UC ReX)

Preparation for Patient-Centred Research

Case Study: Improve Care Now